Please see the table below for the expected fusion breakpoint locations. Note that hg19 is used as the reference sequence.
|Expected Fusion||Position of 5' Breakpoint in RNA transcript||Position of 3' Breakpoint in RNA transcript|
|EML4 exon 13 → ALK exon 20||chr2:42522656||chr2:29446394|
|CCDC6 exon 1 → RET exon 12||ch10:61665880||chr10:43612032|
|SLC34A2 exon 4 → ROS1 exon 32, and 34||chr4:25665952||chr6:117650602 (ROS1 exon 32) and chr6:117645578 (ROS1 exon 34)|
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