This functionality is enabled through a mechanism called "Watched Folders". A user with the appropriate permissions may configure a directory on the server for Archer Analysis to monitor. When sample files or a folder of sample files appear in the watched directory, Analysis will automatically process these files according to the Watched Folder template.
Typically a demultiplexer would be responsible for performing read assignment and copying sample files to these watched folder locations. This is beyond the scope of Archer Analysis itself but we can provide assistance in helping you configure this in some scenarios.
Please see the user manual for instructions on setting up this feature. For a copy of the Archer Analysis User Manual contact firstname.lastname@example.org.
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